The Public Data Portal supports queries based on taxonomy(scientific names only), geography, attribution fields (i.e. collectors and taxonomists), specimen depositories, project or dataset codes, specimen and sequence identifiers (sampleids, museumids, processed, etc). Free text searches are allowed, the system will try to extract meaningful terms from the search. Search terms should be separated by a space, search terms containing more than one word ("United States" or "Mus musculus") should be wrapped in quotes.
Search examples (Searches are case insensitive):
Culicidae: will return all the mosquitoes in the database
Mammalia Aves: will return all the mammals and birds in the database. Using two terms under the same context (taxonomic in this case), returns all records that match either term.
Aves Peru: will return all the birds collected in Peru. Using two terms under a different context (taxonomic and geographic), returns records that only match both terms.
Hawaii -Chordata: will return all non-chordates, or invertebrates, collected in Hawaii. It is often necessary to exclude records based on a search criteria and is accomplished by adding a minus sign immediately in front of the search term.
"Biodiversity Institute of Ontario" Lepidoptera Florida: will return all moths and butterflies in the Biodiversity Institute of Ontario collection that were collected in Florida. Complex queries are possible by combining multiple search terms.
Search Guidelines:
No spaces in terms when using a multiterm seach (correct: "United States" Mammalia)
Negative symbol (-) is an exclusion operator which must be preceded by a space
If the same term appears in multiple contexts (i.e. "Florida" appears in both the geography list and in "University of Florida"). When using a free text search for the state Florida, employ the context clarification '[geo]' (eg Florida[geo]). Other context clarification tags are [tax], [ids], [inst], [researcher].
Paul D. N. Hebert , Sujeevan Ratnasingham , Evgeny V. Zakharov , Angela C. Telfer , Valerie Levesque-Beaudin , Megan A. Milton , Stephanie Pedersen , Paul Jannetta and Jeremy R. deWaard Counting animal species with DNA barcodes: Canadian insects Philosophical transactions of the royal society b 2016-09-05;371(1702):0-0 (PDF)
Sujeevan Ratnasingham and Paul D. N. Hebert A DNA-Based Registry for All Animal Species: The Barcode Index Number (BIN) System PLoS ONE 2013-07-13;8(7):e66213 (PDF)
P. D. N. Hebert, J. R. deWaard and J.-F. Landry DNA barcodes for 1/1000 of the animal kingdom Biology Letters 2009-12-16;6(3):359-362 (PDF)
Sikes, D.S., M. Bowser, J. M. Morton, C. Bickford, S. Meierotto, K. Hildebrandt. Building a DNA barcode library of Alaska’s non-marine arthropods Genome 2016-10-21;60(3):248-259 (PDF)
TREE RECONSTRUCTION OF BIN & NEAREST NEIGHBOR:
HAPLOTYPE NETWORK:
Color & Label Scheme:
COLLECTION LOCATION:
Countries:
Canada - [206]
United States - [16]
DATA MANAGERS:
Public Data:
Private Data:
CBG Project Management Team - [151] Alex Smith - [2] CBG Collections Unit - [11] Jean-Francois Landry - [8] Jeremy deWaard - [23] Paul D.N. Hebert - [3] Chris Looney - [4] Robin M. Floyd - [5] Derek S. Sikes - [2] Matt Lemay - [2] Scott E. Miller - [2] Mikko Pentinsaari - [3] Jason R Grant - [1] Gregory R. Pohl - [2]
Paul D.N. Hebert - [1] Ellen H. Yerger - [1] CBG Collections Unit - [1]
BIN COMPLIANT WITH METADATA REQUIREMENTS
Specimen Images:
MEC697-04 {Clepsis persicana}
License:
Copyright (2007)
License Holder:
Jean-Francois Landry, Canadian National Collection
Canadian Forest Service, Pacific Forestry Centre - [1]
Canadian National Collection of Insects, Arachnids and Nematodes - [8]
Centre for Biodiversity Genomics - [179]
Indiana University of Pennsylvania - [1]
Research Collection of Daniel Handfield - [11]
Research Collection of G. Pohl - [2]
Research Collection of John Brown - [2]
Research Collection of M. Alex Smith - [2]
Royal British Columbia Museum - [5]
Smithsonian Institution, National Museum of Natural History - [2]
University of Alaska Museum - [3]
University of British Columbia, Beaty Biodiversity Museum, Spencer Entomological Collection - [1]
Washington State Department of Agriculture - [4]
Sequencing Centers:
Centre for Biodiversity Genomics - [195]
Photography:
Alexandra Knapp - [1] CBG Photography Group - [77] CBG Robotic Imager - [4] CBG Robotic Rig - [7] Casey Bickford - [2] Dallas Hudson - [1] Deneka, A. J. - [2] Hakai Institute, Terrestrial BioBlitz - [1] Jaclyn McCormick - [17] Jason Grant - [1] Jean-Francois Landry - [8] Jeremy deWaard - [5] Libby Avis - [3] Nick Jeffery - [3] Rick Turner - [1] Sara Wickham - [2] Sarah Dykeman - [3] Young-suk - [2]
Collectors:
A. W. Thomas - [9] A. W.Thomas - [1] A.V.Borisenko - [2] Allan Woodhouse - [1] Aud I. - [1] B. Duval - [1] BIOBus 2012 - [5] BIObus 2008 - [28] BIObus 2009 - [11] BIObus 2010 - [4] BIObus 2013 - [3] Beadling - [1] Bruce A. Bennett - [1] C.S. - [4] C.W.P. - [1] CBG Collections Staff - [4] CBH staff - [7] Claudia Copley - [1] Craig M - [1] D.Collet - [3] D.Porco - [2] Dallas Clell Hudson - [1] Daniel Handfield - [11] Darren Copley - [1] David Holden - [2] Deneka - [1] Dominique M. Collet - [2] Emma Sylvester - [1] Eric LAGASA - [2] Evan Perry - [1] F.Tremblay - [6] Fischer - [1] G.R. - [1] Gregg Walker - [1] Gregory R. Pohl - [1] Guppy - [4] Hervanek - [1] Ian McDonald - [5] J. Adams - [1] J. Heron - [1] J.Brewster - [1] J.Cossey - [1] J.E.Cossey - [9] J.R. - [5] J.R.Straka - [11] J.Sones - [1] J.Straka - [1] James Adams - [1] Jamie - [8] Jason Grant - [1] Jean-Francois Landry - [7] Joa - [1] K. McCabe - [3] K. Yoon-Henderson - [1] K.Cox - [2] K.Phillip - [2] Keating - [1] Keith Pickthorn - [4] Koehn - [1] L Mavin & M Young - [1] L. Janke - [3] L.Avis - [3] M. Koshuba - [1] M.A.Smith - [2] Mary Whitley - [1] Melanie - [1] Monica J - [1] N. Jeffery - [1] N.Dudley - [1] N.W.Jeffery - [9] Nicole Labine - [2] P.D.N. Hebert - [2] Park Staff - [6] Parks Canada - [1] Paul Ayles - [1] Paul Hebert - [4] Pohl - [1] R.Avis - [3] R.Pojar - [9] Roberta Tesar - [2] S. Cannings - [4] S.Chisholm - [1] S.Davidson - [1] S.Devita - [2] S.McCubbin - [1] S.V.Kruskop - [2] Stephanie Church - [1] T.Davison - [1] Tyler Zemlak - [7] deWaard - [5]
Specimen Identification:
Alex Smith - [2] Angela Telfer - [29] Anthony W. Thomas - [10] BOLD ID Engine - [2] BOLD Machine Learning Tool Kit - [1] C. D. Ferris - [2] Daniel Handfield - [11] Eric H Lagasa - [3] Evgeny V. Zakharov - [10] Gregory R. Pohl - [2] Jason R Grant - [1] Jason Straka - [2] Jean-Francois Landry - [8] Kate Perez - [26] Leland M. Humble - [1] Libby Avis - [3] Nicholas Jeffery - [1] Paul D.N. Hebert - [4] Renee Miskie - [4] Sujeevan Ratnasingham - [8] USNM Curators - [2]